Predicting CYP induction in stable cell lines
Assessing gene transcription as an endpoint for determining induction of drug metabolizing enzymes and transporters has become the “method of choice” in the FDA’s latest draft Guidance for Industry drug interaction studies. Increased gene transcription due to NCE exposure can be determined by two distinct methods, nuclear receptor activation and changes in mRNA levels in primary hepatocyte cultures.
Human hepatocytes are generally considered the “preferred system” for predicting clinical inducers. Alternatives for assessing CYP3A4 induction by potential drugs, are cell-based transactivation assays, which employ HepG2 cells transfected either transiently or stably with a pregnane X receptor (PXR) expression vector, plus a luciferase reporter gene containing CYP3A4 response elements (proximal promoter and distal xenobiotic-responsive enhancer module). DPX2 cells (developed by Puracyp), which are stable hPXR transfectants, show CYP3A enzyme induction (measured as increased luciferase activity) by therapeutics which is comparable to that reported with human hepatocytes (Krueger et al., 2002; Trubetskoy et al., 2005; Raucy and Lasker, 2010). Despite lacking certain phenotypic properties inherent to human hepatocytes, such as constitutive expression of P450 and nuclear receptor proteins, DPX2 cells nevertheless respond to typical CYP3A inducers [e.g., rifampicin (RIF)] with a marked increase in CYP3A metabolic activity (Trubetskoy et al., 2005), eliminate screening dependence on an uninterrupted supply of human hepatocytes, and exhibit much lower interexperimental variability. The use of hepatocytes in high-throughput screening and structure-activity relationship (SAR) studies during early discovery is limited, whereas DPX2 cells can readily surmount such issues (Shukla et al., 2011).
DXP2 to assess PXR inducers – Fee-for-services
Receptor activation screening services using proprietary cell lines by Puracyp enable researchers to identify NCEs that have the potential to activate human, rat, mouse, dog or monkey SXR/PXR, AhR and CAR. These services are offered in Europe through tebu-bio, at their own labs based near Paris.
The test system is high-throughput consisting of a stably transformed tumor cell line (DPX2) plated on 96-well microtiter plates. The enhancers (PXRE) and promoters linked to a reporter (luciferase) are stably integrated into the tumor cells. Activation is assessed by monitoring reporter gene activity and by comparing results to analogous cells treated with solvent. Positive controls will consist of cells treated with 6 concentrations of rifampicin. In this manner, compounds activating PXR can be easily and expediently identified. Because these are stably integrated cell lines, three to 30 fold PXR activation may be observed.
To aid in interpreting the results produced in Puracyp’s cell lines, controls producing various levels of receptor activation (fold induction) are included with your compounds. Controls included in the assay represent potent levels of receptor activation. Results from screening of your compounds are expressed as fold induction and as a % of each control. In this manner, compounds that exhibit >75% of a control at 10 μM can be considered as a similar activator. An example of two unknowns, UK1 and UK2, are shown below in the table.
It is important to emphasize that the patterns or trends in receptor activation will be the same within a specific cell-‐based assay. For this reason, other positive controls will always be included at concentrations that give potent activation. Test compound response is then compared to the response given by the positive control at an equimolar dose in each cell line (2-4)
tebu-bio has been a Puracyp service provider for more than 10 years now. If you’re interested in benefiting from their expertise in fee-for-services based on Puracyp’s technology, make a note of their easy address to start designing your project: firstname.lastname@example.org.
What about doing it yourself?
You might be interested in these cell-based kits, which contain everything you’ll need for multiplex-type assays, including division arrested cell lines, Promega’s One-Glo™ for assessing receptor activation (via luciferase), P450-Glo™ substrates for assessing CYP3A or CYP1A mediated metabolism, and CellTiter-Fluor™ for measuring cell viability. All you’ll have to supply are the test compounds!
Results obtained with Puracyp’s Receptor Activation Assay kits are highly reproducible and lack the variability inherent to other methodology. Little effort is required to perform the tests and the entire experiment is completed in 2 days with a total of 3-6 hours research time. Several different kit formats and cell lines are available, including human and rodent PXR and AhR (human).